Sequence Database Search Techniques I: Blast and PatternHunter tools Zhang Louxin

First Page		Document Content
Date: 2009-04-28 05:02:38 BLAST Smith–Waterman algorithm BLAT Dynamic programming Science Bioinformatics Computational phylogenetics		Sequence Database Search Techniques I: Blast and PatternHunter tools Zhang Louxin Add to Reading List Source URL: www.bii.a-star.edu.sg Download Document from Source Website File Size: 536,05 KB Share Document on Facebook

	Today’s Lecture • Edit graph & alignment algorithms – Smith-Waterman algorithm – Needleman-Wunsch algorithm • Local vs global DocID: 1vmkN - View Document
	A Probabilistic Model of Local Sequence Alignment That Simplifies Statistical Significance Estimation Sean R. Eddy* Howard Hughes Medical Institute, Janelia Farm Research Campus, Ashburn, Virginia, United States of Ameri DocID: 1gxDd - View Document
	A Bioinformatics Approach to 3D Shape Matching Manuele Bicego(B) , Stefano Danese, Simone Melzi, and Umberto Castellani Dipartimento di Informatica, University of Verona, Strada le Grazie 15, 37134 Verona, Italy manuele. DocID: 1gh4X - View Document
	Sequence Alignment Guided By Common Motifs Described By Context Free Grammars Abdullah N. Arslan Department of Computer Science University of Vermont Burlington, VT 05405, USA DocID: 1ggiG - View Document
	Protein Engineering vol.12 no.5 pp.387–394, 1999 PSIC: profile extraction from sequence alignments with position-specific counts of independent observations Shamil R.Sunyaev1,2,3, Frank Eisenhaber1,2,4, DocID: 1geJN - View Document