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Molecular modelling / Computational chemistry / Intermolecular forces / Molecular dynamics / Accessible surface area / Van der Waals radius / Implicit solvation / Van der Waals surface / Johannes Diderik van der Waals / Chemistry / Protein structure / Science


ProteinVolume: calculating molecular van der Waals and void volumes in proteins
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City

Berezovsky / Royer / Troy / Cuff / Optimizations Grid / Lovell / /

Company

Fleming / Protein Data Bank / Pall / Creative Commons / VVDW / Google / /

Country

United States / /

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Facility

Rensselaer Polytechnic Institute / /

IndustryTerm

web interface / surface algorithm / volume processing / free web server / local computing resources / grid-based algorithm / server hardware / free-standing software / web-based interface / software packages / flood-fill algorithm / floodfill algorithm / energy / /

OperatingSystem

VMS / /

Organization

Rensselaer Polytechnic Institute / US National Science Foundation / Department of Biological Sciences / Center for Biotechnology and Interdisciplinary Studies / /

Person

A. Van Der Waals / George I Makhatadze / Calvin R Chen / /

Position

extractor / /

Product

CHARMM27 / /

ProgrammingLanguage

AJAX / Java / /

ProvinceOrState

Alabama / South Carolina / Mississippi / New York / California / /

PublishedMedium

PLoS One / /

Technology

alpha / surface algorithm / Bioinformatics / flood-fill algorithm / Java / Biotechnology / Monte Carlo algorithm / grid-based algorithm / Simulation / Operating system / web server / floodfill algorithm / /

URL

http /

SocialTag