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Cheminformatics / Mathematical chemistry / Theoretical chemistry / Chemical kinetics / Graph theory / Enzyme / Chemical reaction / Molecular graph / Catalysis / Chemistry / Science / Metabolism


Evolution of Metabolic Networks A Computational Framework Christoph Flamm1 , Alexander Ullrich2 , Heinz Ekker1,3 , Martin Mann4 , Daniel H¨ogerl3 , Markus Rohrschneider5 , Sebastian Sauer1 , Gerik Scheuermann5 , Konstan
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Document Date: 2010-02-07 17:34:46


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Wien / Santa Fe / Freiburg / Leipzig / Vienna / /

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G A A A UU GG U C AG / G A A A GG UU U C AG / /

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Germany / Austria / United States / /

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FH Campus / Graph Grammar Library / University of Leipzig / Santa Fe Institute / University of Freiburg / Max Planck Institute / Fraunhofer Institute / University of Vienna / /

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chemical universe / chemical reactions networks / energy predictions / reaction systems / chemical transformations / proper chemical reactions / visualization tools / chemical detail increases / stable abundant chemical species / free energy / neutral network / activation energy computation / chemical reaction networks / chemical reaction / quantum chemical computations / bacterial metabolic network / unfavorable products / desirable end products / primitive life-like systems / polymer systems / energy / chemical reaction network / energy function / physico-chemical principles / chemical reactions / prebiotic reaction networks / inaccessible reaction products / layout algorithm / reaction network / chemical reaction mechanisms / well-defined energy differences / chemical entities / chemical structure graph / solvation energy / chemical research / dynamic programming algorithms / potential energy surface / reaction classification systems / early systems / consistent energy function / minimal free energy / large reaction networks / metabolic networks / metabolic network / chemical organization / energy model / chemical bonds / chemical cracking / /

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Albert / Immunology / Institute / /

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Fraunhofer Institute for Cell Therapy and Immunology / University of Leipzig / Institute for Theoretical Chemistry / Department of Computer Science / Computer Science / and Interdisciplinary Center for Bioinformatics / University of Vienna / Santa Fe Institute / Max Planck Institute for Mathematics / Institute for Computer Science / University of Freiburg / /

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Walter Fontana / Peter F. Stadler / /

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computer scientist / Corresponding author / point head / /

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HTC HD2 Smartphone / /

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C++ / /

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New Mexico / /

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Genomics / Bioinformatics / Cell Therapy / Metabolic Networks / layout algorithm / simulation system / CSL algorithm / dynamic programming algorithms / molecular evolution / simulation / genotype / recombination / dedicated stateof-the-art VF-algorithm / /

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