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Protein structure / Computational chemistry / Molecular modelling / Root-mean-square deviation / Clique / Homology modeling / Molecular dynamics / Conformational isomerism / Structural alignment / Chemistry / Bioinformatics / Protein methods


J. Mol. Biol[removed], 287±302 A Graph-theoretic Algorithm for Comparative Modeling of Protein Structure Ram Samudrala1,2 and John Moult1* 1
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Document Date: 2005-12-27 20:34:03

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interconnected networks / search method / continuous search methods / comparative modeling applications / database search method / main chain / genetic algorithms / database search / city network / model main chain / polypeptide chain / clique-®nding algorithm / chemical isomers / rough energy landscape / energy surface / search space / search methods / generated using a database search / /

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292 Graph-theoretic Algorithm / 293 Graph-theoretic Algorithm / X-ray / 289 Graph-theoretic Algorithm / 291 Graph-theoretic Algorithm / Biotechnology / 295 Graph-theoretic Algorithm / 296 Graph-theoretic Algorithm / computational chemistry / 294 Graph-theoretic Algorithm / 290 Graph-theoretic Algorithm / clique-®nding algorithm / /

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