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Protein biosynthesis / Gene expression / Molecular genetics / Transfer RNA / Transfer-messenger RNA / Intron / Gene / Nucleic acid / Stem-loop / Biology / Genetics / RNA


Published online January 2, 2004 Nucleic Acids Research, 2004, Vol. 32, No. 1 11±16 DOI: [removed]nar/gkh152 ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences
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Document Date: 2004-01-02 17:51:11


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Oxford University Press / AMD / /

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United States / Australia / /

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cent / /

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Lund University / Bjorn Canback1 / * Murdoch University / Ecology Building / /

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algorithm / transcription termination signal search / tmRNA search program / benchmark algorithm / on-line analysis / tRNA search algorithm / heuristic search algorithms / energy algorithm / tRNA prediction algorithm / poor search speed / maximum search sensitivity / tRNA prediction tool / tRNA cloverleaf folding free energy change / search wraps / selective tRNA detection algorithms / tmRNA search algorithm / search speed / heuristic tRNA search algorithms / tmRNA detection algorithm / heuristic algorithm / search time decreases / search sequence / heuristic algorithms / tRNA search program / search progress / search time / benchmark search algorithm / /

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set 1290 / /

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Linux / /

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Murdoch University / Perth / European Union / Oxford University / Lund University / /

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David Ardell / Gueneau de Novoa / Burke / Dean Laslett / Williams de Novoa / Tsui / V / /

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speci®c covariance model for each lineage / D.J. / covariance model for analysis / /

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Western Australia / North Carolina / /

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the Nucleic Acids Research / Nucleic Acids Research / /

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Western Australia / /

Technology

heuristic algorithm / independently developed algorithm / RAM / Linux / benchmark search algorithm / MATERIALS AND METHODS Search algorithm / tmRNA search algorithm / heuristic tRNA search algorithms / Tsui folding energy algorithm / human genome / tRNA search algorithm / heuristic search algorithms / tRNA prediction algorithm / folding energy algorithm / genetic code / selective tRNA detection algorithms / one algorithm / tmRNA detection algorithm / benchmark algorithm / Eu®ndtrna algorithm / ARAGORN tmRNA search algorithm / ARAGORN algorithm / /

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