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Protein homology
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#	Item
1	Genome Informatics 12: 332–Classification and Analysis of Inter-Helical Loop Segments in Membrane Proteins Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2002-01-17 03:51:06 Biology Cell biology Protein structure Integral membrane proteins Membrane biology Bioinformatics Transmembrane proteins Transmembrane domain Alpha helix Membrane protein G proteincoupled receptor Homology modeling
2	284–285  1999 Oxford University Press Nucleic Acids Research, 1999, Vol. 27, No. 1 Add to Reading List Source URL: www.proteininformationresource.org Language: English - Date: 2005-11-21 12:41:46 Biology Bioinformatics Biological databases Computational phylogenetics Genomics Protein structure Protein superfamily Superfamily database Sequence alignment Protein Information Resource Homology Sequence database
3	1 Large-scale multiple sequence alignment and phylogeny estimation Tandy Warnow1,∗ 1 Department of Computer Science, University of Texas at Austin, Austin, Add to Reading List Source URL: tandy.cs.illinois.edu Language: English - Date: 2014-08-30 16:01:16 Computational phylogenetics Bioinformatics Phylogenetics Multiple sequence alignment Sequence alignment Protein methods Phylogenetic tree Structural alignment Maximum parsimony Homology Protein superfamily Clustal
4	Identification of Unknown Proteins Through Mining Distant Protein Homology With Mass Spectral Information Lan Huang, Richard J. Jacob, Scott C.-H. Pegg, Michael Baldwin, Patricia C. Babbitt, A.L. Burlingame. The explosio Add to Reading List Source URL: prospector.ucsf.edu Language: English - Date: 2010-08-27 11:57:02
5	Published online 19 DecemberNucleic Acids Research, 2016, Vol. 44, No. 7 e63 doi: nar/gkv1479 SimRNA: a coarse-grained method for RNA folding Add to Reading List Source URL: www.ncbi.nlm.nih.gov Language: English RNA Nucleic acid tertiary structure Biomolecular structure Nucleic acid structure Homology modeling Nucleic acid secondary structure Root-mean-square deviation Protein structure prediction Gene expression Biomolecule Ribosome Tetraloop
6	SimRNAweb: a web server for RNA 3D structure modeling with optional restraints Add to Reading List Source URL: nar.oxfordjournals.org Language: English Biology RNA Genetics DNA Protein structure Biomolecules Molecular biology Nucleic acid structure prediction Homology modeling Biomolecular structure STING Nucleic acid tertiary structure
7	Conservation of Physicochemical Properties during Protein Evolution Masashi Fujita Masumi Itoh Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2005-01-20 03:11:28 Biology Bioinformatics Genetics Evolutionary biology Computational phylogenetics Molecular genetics Amino acid Mutation Conserved sequence Sequence alignment Homology Protein
8	Protein Sequence-Structure Alignment Using 3D-HMM Masashi Fujita Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2004-06-07 21:35:17 Bioinformatics Sequence alignment Protein structure prediction Homology modeling BLAST Sequence analysis Structural alignment Hidden Markov model HH-suite Multiple sequence alignment
9	Indexing protein sequences with MINOS. H. Ripoche 1 Add to Reading List Source URL: www.jsbi.org Language: English - Date: 1998-01-09 02:49:50 Bioinformatics Sequence alignment Sequence motif Nucleic acid sequence Sequence Homology PROSITE Protein domain DNA Protein structure Formal concept analysis Sequence analysis
10	438 Genome Informatics 13: 438–Weak Homology Detection by Profile-Profile Comparison Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2002-12-19 23:03:38 Bioinformatics Biology Protein structure Computational phylogenetics Computational science Protein methods BLAST Protein family Superfamily database PSIPRED Protein domain Protein superfamily

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