protocol Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks Cole Trapnell1,2, Adam Roberts3, Loyal Goff 1,2,4, Geo Pertea5,6, Daehwan Kim5,7, David R Kelley1,2, Harold

Source URL: ccb.jhu.edu

HIPPOCAMPUS 16:629–RAPID COMMUNICATION Distinct Patterns of Gene Expression in the Left and Right Hippocampal Formation of Developing Rats Joseph R. Moskal,1 Roger A. Kroes,1 Nigel J. Otto,1 Omid Rahimi,2,3

Source URL: falk.mccormick.northwestern.edu

protocol Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks Cole Trapnell1,2, Adam Roberts3, Loyal Goff 1,2,4, Geo Pertea5,6, Daehwan Kim5,7, David R Kelley1,2, Harold

Source URL: www.ccb.jhu.edu

© 2003 Nature Publishing Group http://www.nature.com/naturegenetics B R I E F C O M M U N I C AT I O N S (dsRNA) molecules between transcripts from the truncated LTR promoter and the U6 promoter. To rule this out, we i

Source URL: www.ieu.uzh.ch

• Biology
• Molecular evolution
• Gene expression
• Genetics
• Evolutionary biology
• Molecular genetics
• Evolution
• Gene
• Escherichia coli
• Regulation of gene expression
• Mutation

Towards a whole-cell modeling approach for synthetic biology Oliver Purcell, Bonny Jain, Jonathan R. Karr, Markus W. Covert, and Timothy K. Lu Citation: Chaos 23, ); doi: View online: http:/

Source URL: covert.stanford.edu

• Gene expression
• Molecular biology
• Synthetic biology
• Molecular genetics
• Mollicutes
• Codon usage bias
• Ridge
• Gene regulatory network
• Mycoplasma genitalium
• Artificial gene synthesis
• Cell cycle
• Gene

protocol Fluorescent in situ sequencing (FISSEQ) of RNA for gene expression profiling in intact cells and tissues Je Hyuk Lee1,6, Evan R Daugharthy1–3,6, Jonathan Scheiman1,2, Reza Kalhor2, Thomas C Ferrante1, Richard

Source URL: arep.med.harvard.edu

Neuroscience– 49 MODELING DEPRESSION: SOCIAL DOMINANCE–SUBMISSION GENE EXPRESSION PATTERNS IN RAT NEOCORTEX R. A. KROES,a J. PANKSEPP,a,b J. BURGDORF,b N. J. OTTOa AND J. R. MOSKALa*

Source URL: falk.mccormick.northwestern.edu

Structure and timescale analysis in genetic regulatory networks Madalena Chaves, Eduardo D. Sontag and R´eka Albert Abstract— Regulation of gene expression is achieved through networks of interactions among genes and

Source URL: users.phys.psu.edu

Studying the effect of cell division on expression patterns of the segment polarity genes Madalena Chaves∗ and R´eka Albert† Abstract The segment polarity gene family, and its gene regulatory network, is at the basi

Source URL: users.phys.psu.edu

More About Converting BNF to PEG∗ Roman R. Redziejowski Abstract Parsing Expression Grammar (PEG) encodes a recursive-descent parser with limited backtracking. The parser has many useful properties. Converting PEG to a

Source URL: www.romanredz.se