Structural alignment

Results: 190



#Item
1

Incorporating Structural Alignment Biases into an Attentional Neural Translation Model arXiv:1601.01085v1 [cs.CL] 6 JanTrevor Cohn and Cong Duy Vu Hoang and Ekaterina Vymolova

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Source URL: arxiv.org

- Date: 2016-01-06 20:27:46
    2Bioinformatics / Biology / Computational phylogenetics / Protein methods / Matrices / Protein structure / Sequence alignment / Substitution matrix / Multiple sequence alignment / BLOSUM / Protein structure prediction / Structural alignment

    Vol. 1 noPages 1–1 BIOINFORMATICS Using an alignment of fragment strings for

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    Source URL: iddo-friedberg.net

    Language: English - Date: 2013-02-06 13:49:51
    3Biology / Bioinformatics / Protein structure / Computational phylogenetics / Nucleic acids / Solvents / Nucleic acid sequence / Substitution matrix / Sequence alignment / Protein domain / STING / Solvent exposure

    Local Packing Density Is the Main Structural Determinant of the Rate of Protein Sequence Evolution at Site Level

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    Source URL: www.ncbi.nlm.nih.gov

    Language: English
    4Computational phylogenetics / Bioinformatics / Biology / Multiple sequence alignment / Sequence alignment / Phylogenetic tree / Maximum parsimony / Structural alignment / Protein superfamily / Clustal / Phylo / BAli-Phy

    1 Large-scale multiple sequence alignment and phylogeny estimation Tandy Warnow1,∗ 1 Department of Computer Science, University of Texas at Austin, Austin,

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    Source URL: web.engr.illinois.edu

    Language: English - Date: 2014-08-30 16:01:16
    5Bioinformatics / Biology / Computational phylogenetics / Genetics / Sequence alignment / Multiple sequence alignment / Sequence analysis / Nucleic acid sequence / Dynamic programming / Phylo / Sequence motif / Nucleic acid structure prediction

    Genome Informatics 12: 184–A Mini-Greedy Algorithm for Faster Structural RNA Stem-Loop Search

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    Source URL: www.jsbi.org

    Language: English - Date: 2002-01-17 03:51:05
    6Bioinformatics / Biology / Protein structure / Computational phylogenetics / Protein methods / Structural biology / Threading / Multiple sequence alignment / Sequence alignment / Protein structure prediction / Protein superfamily / Protein folding

    Genome Informatics 13: 163–Folding Pattern Recognition in Proteins Using Spectral Analysis Methods

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    Source URL: www.jsbi.org

    Language: English - Date: 2002-12-09 05:53:40
    7Computational phylogenetics / Bioinformatics / Phylogenetics / Multiple sequence alignment / Sequence alignment / Protein methods / Phylogenetic tree / Structural alignment / Maximum parsimony / Homology / Protein superfamily / Clustal

    1 Large-scale multiple sequence alignment and phylogeny estimation Tandy Warnow1,∗ 1 Department of Computer Science, University of Texas at Austin, Austin,

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    Source URL: tandy.cs.illinois.edu

    Language: English - Date: 2014-08-30 16:01:16
    8Machine translation / Linguistics / Computational linguistics / Interlinear gloss / Translation / Bitext word alignment / Applied linguistics / Parallel text / Gloss / Statistical machine translation / Morpheme / Dependency grammar

    Multilingual Structural Projection across Interlinearized Text Fei Xia Department of Linguistics University of Washington Seattle, WA 98195

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    Source URL: faculty.washington.edu

    Language: English - Date: 2007-03-26 17:47:37
    9Bioinformatics / Biology / Computational phylogenetics / Protein methods / Protein structure / Matrices / Sequence alignment / Structural alignment / BLAST / FASTA / Substitution matrix / Sequence analysis

    183 EVALUATION OF SEQUENCE ALIGNMENTS OF DISTANTLY RELATED SEQUENCE PAIRS WITH RESPECT TO STRUCTURAL SIMILARITY AYSAM GÜRLER

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    Source URL: www.jsbi.org

    Language: English - Date: 2007-09-27 22:33:12
    10Bioinformatics / Sequence alignment / Protein structure prediction / Homology modeling / BLAST / Sequence analysis / Structural alignment / Hidden Markov model / HH-suite / Multiple sequence alignment

    Protein Sequence-Structure Alignment Using 3D-HMM Masashi Fujita

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    Source URL: www.jsbi.org

    Language: English - Date: 2004-06-07 21:35:17
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