Protein Data Bank / Nucleic Acids Res / Protein Substructure Alignment / Oxford University Press / AMD / Garland Publishing Inc. / /
Country
United States / Columbia / /
Currency
pence / / /
Event
Product Issues / Product Recall / /
Facility
University of Missouri-Columbia / University of Missouri / Informatics Institute / University of Missouri-Columbia Research Council / /
IndustryTerm
sequence alignment tools / protein structure classification algorithm / protein classification tool / representative algorithms / accessible tools / dot product / search result / data bank / similarity search / on-line retrieval / structural alignment algorithms / structural alignments algorithms / heuristics and search locally optimal solutions / individual alignment algorithm / structure database search / newly-discovered protein chain / structure alignment algorithms / search space / search efficiency / be captured using sequence alignment tools / /
MarketIndex
IPSA 40 / IPSA MultiProt CE DALI / /
OperatingSystem
Linux Fedora / /
Organization
University of Missouri / Mapping Protein Substructure Unit / Informatics Institute / University of Missouri / Columbia / Department of Computer Science / Shumaker Endowment / Medical and Biological Digital Library Research Lab / Oxford University / /
Person
Tan / Lee / Dong Xu / Aung / Jung / Dmitry Korkin / Anna Tramontano / Chi-Ren Shyu / Hao Chi / /
Position
Editor / local substructure representative / substructure representative / duplicate substructure representative / Author / protein substructure representative / Representative / local representative / /
Product
levels / Precision- / Nikon D60 Digital Camera / /
ProgrammingLanguage
Java / php / /
ProvinceOrState
Washington / Missouri / Nova Scotia / /
PublishedMedium
Molecular Biology / /
Technology
individual alignment algorithm / RAM / Bioinformatics / X-ray / 3-D / detailed structure alignment algorithms / Linux / existing IR algorithms / MUSTA algorithm / structural alignment algorithms / The algorithm / protein structure classification algorithm / X. The algorithm / content-based E-Predict algorithm / IPSA algorithm / functional genomics / SSAP algorithm / structural alignments algorithms / proposed algorithm / structural genomics / Java / 4 Algorithm / Unit Extraction Our algorithm / 1000 series processors / DALI algorithm / http / molecular evolution / constructed using the SSAP algorithm / /
Bioinformatics Advance Access published August 10, 2009 Efficient SCOP fold classification and retrieval using index-based protein substructure alignments (IPSA) Pin-Hao Chi, Bin Pang, Dmitry Korkin and Chi-Ren Shyu ∗