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Biology / Sequence alignment / T-Coffee / Multiple sequence alignment / Structural alignment / Sequence analysis / Nucleic acid structure prediction / Nucleic acid sequence / Substitution matrix / Bioinformatics / Science / Computational phylogenetics


Published online 17 April[removed]Nucleic Acids Research, 2008, Vol. 36, No. 9 e52 doi:[removed]nar/gkn174 R-Coffee: a method for multiple alignment
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Document Date: 2009-07-17 07:18:54

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Barcelona / Vienna / /

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Red Hat / R. and GrishinN.V. / Expresso / M.S.P. / Creative Commons / /

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United States / Ireland / /

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Facility

The Conway Institute of Biomolecular / University College Dublin / /

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IndustryTerm

alignment tool / library processing/ extension algorithm / low chemical complexity / software implementation / free energy / free-energy minimization using nearest-neighbor energy parameters / online database / secondary structure server / consensus energy / minimal free energy / prediction algorithm / throughput applications / alignment algorithm / combination protocol / /

MarketIndex

Structural Conservation / /

OperatingSystem

UNIX / Mac OS X / Red Hat Enterprise Linux / Microsoft Windows / /

Organization

Conway Institute of Biomolecular and Biomedical Research / University College Dublin / US Federal Reserve / Centre for Genomic Regulation / Science Foundation Ireland / /

Person

Sean Eddy / Marna M-Locarna / Aiguader / /

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Position

Author / Markov model for progressive multiple alignment / Marshall / /

Product

Linux / Wilcoxon / RNAfold / /

ProgrammingLanguage

L / T / /

PublishedMedium

Nucleic Acids Research / /

Technology

Miller algorithm / Cmfinder algorithm / T-Coffee algorithm / RAM / Bioinformatics / Linux / RNA alignment algorithm / prediction algorithm / combination protocol / library processing/ extension algorithm / human genome / /

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http /

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