Chip-sequencing

Results: 159



#Item
111Protein methods / Molecular biology / Immunologic tests / Protein-protein interaction assays / Immunoprecipitation / Chromatin immunoprecipitation / Polymerase chain reaction / Chromatin / Chip-sequencing / Biology / Laboratory techniques / Chemistry

Farnham Lab_REMC ChIP and Library Construction Protocol (Oct29_2010)

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Source URL: commonfund.nih.gov

Language: English - Date: 2013-09-20 10:13:14
112Gene expression / Biological databases / Genetics / Cryptography / ENCODE / Chip-sequencing / Transcription factor / Digital signature / Transcription / Biology / Biochemistry / Molecular biology

http://LincsGenomics.org Mario Medvedovic, Siva Sivaganesan, John Reichard, Mukta Phatak, Wen Niu, Jing Chen, Vineet Joshi Placing LINCS perturbagen signatures in the context

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Source URL: lincs.hms.harvard.edu

Language: English - Date: 2013-04-02 14:55:55
113Protein methods / Biochemistry / Genomics / Computational biology / Chip-sequencing / ChIP-on-chip / Biology / Bioinformatics / Science

CV prof. dr hab. Paweł Krajewski E-mail: [removed] Telephone: (+[removed]238x Department of Biometry and Bioinformatics Biometry and Bioinformatics Team

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Source URL: www.igr.poznan.pl

Language: English - Date: 2014-04-11 07:46:02
114Molecular biology / Gene expression / Bioinformatics / Transcription factors / Chip-sequencing / ChIP-on-chip / CTCF / DNA binding site / Chromatin immunoprecipitation / Biology / Biochemistry / Protein methods

BIOINFORMATICS ORIGINAL PAPER Genome analysis

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Source URL: www.psrg.csail.mit.edu

Language: English - Date: 2012-03-01 15:47:27
115Molecular genetics / DNA / Protein methods / Chip-sequencing / DNA binding site / Chromatin immunoprecipitation / Hypersensitive site / DNase-Seq / Chromatin / Biology / Transcription factors / Gene expression

A n a ly s i s Discovery of directional and nondirectional pioneer transcription factors by modeling DNase profile magnitude and shape

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Source URL: www.psrg.csail.mit.edu

Language: English - Date: 2014-05-21 15:52:05
116Transcription factors / Molecular biology / Protein methods / Bioinformatics / DNA binding site / Chip-sequencing / CTCF / Sequence motif / Chromatin immunoprecipitation / Biology / Biochemistry / Gene expression

High Resolution Genome Wide Binding Event Finding and Motif Discovery Reveals Transcription Factor Spatial Binding Constraints Yuchun Guo1,2, Shaun Mahony2*, David K. Gifford2* 1 Computational and Systems Biology Program

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Source URL: www.psrg.csail.mit.edu

Language: English - Date: 2013-04-10 11:39:36
117Molecular biology / Protein methods / Gene expression / RNA / Categorical data / Chip-sequencing / RNA-Seq / Count data / Poisson distribution / Biology / Statistics / Biochemistry

Universal Count Correction for High-Throughput Sequencing Tatsunori B. Hashimoto, Matthew D. Edwards, David K. Gifford* Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Camb

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Source URL: www.psrg.csail.mit.edu

Language: English - Date: 2014-05-21 15:08:18
118Protein methods / Gene expression / Molecular biology / RNA-Seq / File system / Cache / Chip-sequencing / Extensible Storage Engine / Biology / Biochemistry / RNA

Rolfe and Gifford BMC Bioinformatics 2011, 12:278 http://www.biomedcentral.com[removed] SOFTWARE Open Access

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Source URL: www.psrg.csail.mit.edu

Language: English - Date: 2012-03-04 09:54:02
119Transcription factors / Protein methods / Gene expression / DNA / Chip-sequencing / DNA binding site / Chromatin immunoprecipitation / Immunoprecipitation / Hox gene / Biology / Biochemistry / Molecular biology

brief communications © 2011 Nature America, Inc. All rights reserved. Embryonic stem cell–based mapping of developmental

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Source URL: www.psrg.csail.mit.edu

Language: English - Date: 2012-03-01 16:31:46
120Molecular biology / Epigenetics / Gene expression / Transcription factors / Chip-sequencing / Nucleosome / Chromatin immunoprecipitation / Biology / Biochemistry / Protein methods

An Integrated Model of Multiple-Condition ChIP-Seq Data Reveals Predeterminants of Cdx2 Binding Shaun Mahony1.*, Matthew D. Edwards2., Esteban O. Mazzoni3, Richard I. Sherwood4, Akshay Kakumanu1, Carolyn A. Morrison5, Hy

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Source URL: www.psrg.csail.mit.edu

Language: English - Date: 2014-05-21 14:43:17
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