PAUP* Lab Note: This computer lab exercise was written by Paul O. Lewis. Paul has graciously allowed Mark Holder to use and modify the lab for the Summer Institute in Statistical Genetics. Thanks, Paul! In this computer

Source URL: evolution.gs.washington.edu

CS Dept Logo Caps Outlines

Source URL: www.open-bio.org

• Computational phylogenetics
• PAUP*
• Phylogenetics
• Swap

PSODA: Better Tasting and Less Filling Than PAUP Hyrum Carroll Mark Ebbert Mark Clement and Quinn Snell

Source URL: www.biotconf.org

• Bioinformatics
• Genetics
• Maximum parsimony
• PHYLIP
• Tree rearrangement
• PAUP
• Phylogenetic tree
• Phylo
• Nexus file
• Computational phylogenetics
• Science
• Phylogenetics

MacClade 4.08a See http://macclade.org for the latest updates. Hardware and system software requirements Computer: any Apple Macintosh that can run MacOS X up to versionMacClade is not compatible with MacOS X 10.7

Source URL: macclade.org

• Science
• Phylogenetics
• Nexus file
• PAUP
• Phylogenetic tree
• Software bug
• Computer file
• PHYLIP
• Software versioning
• Computational phylogenetics
• Bioinformatics
• Computing

Taxon combinations, parsimony analysis (PAUP[ast]), and the taxonomy of the yellow-tailed woolly monkey, Lagothrix flavicauda

Source URL: pages.nycep.org

• Spider monkey
• Maximum parsimony
• Brown woolly monkey
• Atelinae
• Woolly monkey
• Cladogram
• Cladistics
• Silvery woolly monkey
• Colombian woolly monkey
• Phylogenetics
• Science
• Fauna of South America

Chapter 3 Input files This chapter describes the input file format used by COMPONENT. This format is an extension of the NEXUS format developed for the programs PAUP 3.0 and MacClade by David Swofford, Wayne Maddison, an

Source URL: taxonomy.zoology.gla.ac.uk

• Science
• Nexus file
• Phylogenetic tree
• Unrooted binary tree
• Binary tree
• Tree
• PHYLIP
• Filename
• Clade
• Computational phylogenetics
• Phylogenetics
• Bioinformatics

Published in Comput. Applic. Biosci. 12: , 1996 TREEVIEW: An application to display phylogenetic trees on personal computers Roderic D. M. Page

Source URL: taxonomy.zoology.gla.ac.uk

• Application software
• PAUP
• PHYLIP
• Clustal
• Tree view
• Microsoft Windows
• Microsoft Reader
• Computer file
• Computational phylogenetics
• Science
• Software