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Phrap
Results: 30

#	Item
1	CALF (Compact ALignment Format) VersionComments & suggestions appreciated – please send to Phil Green <>). Main features: (i) In addition to the read-to-reference (or read-to-consensus) m Add to Reading List Source URL: www.phrap.org Language: English - Date: 2008-11-13 16:32:12
2	CS 598AGB Genome Assembly Tandy Warnow 2 Add to Reading List Source URL: tandy.cs.illinois.edu Language: English - Date: 2015-03-30 18:31:43 Bioinformatics Molecular biology DNA sequencing Sequence assembly Hybrid genome assembly Phrap Genome Paired-end tag Craig Venter K-mer Reference genome Shotgun sequencing
3	Supplementary Information and Figures for “Consed: A Graphical Editor for Next-Generation Sequencing” by David Gordon and Phil Green S1 Input data requirements Consed requires reads and alignments either in BAM forma Add to Reading List Source URL: bozeman.mbt.washington.edu Language: English - Date: 2013-12-23 17:42:19 Biology Bioinformatics Molecular biology Genetics DNA sequencing Genomics Computational science Contig Consed Phrap Velvet assembler SAMtools
4	Supplementary Information and Figures for “Consed: A Graphical Editor for Next-Generation Sequencing” by David Gordon and Phil Green S1 Input data requirements Consed requires reads and alignments either in BAM forma Add to Reading List Source URL: www.phrap.org Language: English - Date: 2013-12-23 17:42:19 Bioinformatics Molecular biology DNA sequencing Computational science Genomics Contig Consed Phrap Velvet assembler SAMtools ACE Expressed sequence tag
5	Large-scale sequence comparison: Spaced seeds and suffix arrays Martin C. Frith Computational Biology Research Center, AIST, Tokyo Add to Reading List Source URL: last.cbrc.jp Language: English - Date: 2008-12-23 00:54:27 Science Genetic mapping Computational phylogenetics Sequence alignment Human genome Genome BLAST Phrap Beijing Genomics Institute Bioinformatics Genetics Genomics
6	PDF Document Add to Reading List Source URL: chlamycollection.org Language: English - Date: 2014-08-18 09:24:29 Bioinformatics Biochemistry Genomics DNA Computational science Contig Phrap Library CDNA library Biology Molecular biology Science
7	How do alignment programs perform on sequencing data with varying qualities and from repetitive regions? Xiaoqing Yu1, Kishore Guda2,3, Joseph Willis4, Martina Veigl2, Zhenghe Wang5, Sanford Markowitz3, Mark D. Adams5 an Add to Reading List Source URL: www.biodatamining.org Language: English Molecular biology Computational phylogenetics Protein methods DNA sequencing Phred quality score BLAST Needleman–Wunsch algorithm Chip-sequencing Phrap Biology Science Bioinformatics
8	MacVectorfor Mac OS X System Requirements MacVector 12.7 runs on any PowerPC or Intel Macintosh running Mac OS X 10.5 or higher. It is a Universal Binary, meaning that it runs natively on both PowerPC and Intel b Add to Reading List Source URL: www.macvector.com Language: English - Date: 2015-01-16 18:18:42 Computational science Molecular biology Biochemistry MacVector Phrap Mac OS X Primer Clipboard Cloning Biology Bioinformatics Science
9	Assembler is a MacVector module designed for easy assembly of sequence reads with a few mouse clicks right on your desktop. Based on the industry standard algorithms of Phred and Phrap, Assembler is not only an excellent Add to Reading List Source URL: www.macvector.com Language: English - Date: 2015-01-16 21:07:10 Biology Molecular biology MacVector Phrap Contig FASTQ format Sequence assembly Genome project DNA sequencing Bioinformatics Science Computational science
10	® MacVectorfor Mac OS X System Requirements Add to Reading List Source URL: www.macvector.com Language: English - Date: 2015-01-16 21:30:26 Software Computational science MacVector Phrap Clustal Sequence alignment Mac OS X Multiple sequence alignment BLAST Bioinformatics Science Computational phylogenetics

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