Report from the 2007 NESCent Hackathon: Comparative Phylogenetic Methods in R Event dates: December 10-14, 2007 Participants (* event organizer): On-site Michael Alfaro, Washington State University

Source URL: informatics.nescent.org

Syst. Biol. 65(4):700–710, 2016 © The Author(sPublished by Oxford University Press, on behalf of the Society of Systematic Biologists. All rights reserved. For Permissions, please email: journals.permissions@o

Source URL: www.biologie.ens.fr

• Biology
• Statistical genetics
• Genetics
• Evolutionary biology
• Phylogenetics
• Sexual selection
• Phylogenetic comparative methods
• Evolution
• Natural selection
• Quantitative trait locus
• Akaike information criterion
• Character displacement

Evolutionary Ecology Research, 1999, 1: 895–909 A method for testing the assumption of phylogenetic independence in comparative data Ehab Abouheif* Department of Ecology and Evolution, State University of New York at

Source URL: biology.mcgill.ca

• Phylogenetics
• Statistics
• Regression analysis
• Time series analysis
• Covariance and correlation
• Autocorrelation
• Signal processing
• Phylogenetic tree
• Contrast
• Phylogenetic comparative methods

An experimental study comparing linguistic phylogenetic reconstruction methods Franc¸ois Barbanc¸on,1 Steven N. Evans,2 Luay Nakhleh3 Don Ringe,4 , and Tandy Warnow,5,∗ 1 2

Source URL: web.engr.illinois.edu

• Phylogenetics
• Computational phylogenetics
• Biology
• Maximum parsimony
• Models of DNA evolution
• Luay Nakhleh
• Character evolution
• Edge
• Quantitative comparative linguistics

Josef C Uyeda CURRICULUM VITAE Institute for Bioinformatics and Evolutionary Studies

Source URL: uyedaj.github.io

• Evolutionary biology
• Philosophy of biology
• Macroevolution
• National Evolutionary Synthesis Center
• Evolution
• Phylogenetic comparative methods
• Oregon State University

Journalof Ecology1995, 83, FORUM

Source URL: www.journalofecology.org

• Phylogenetics
• Phylogenetic tree
• Species
• Phylogenetic comparative methods

An experimental study comparing linguistic phylogenetic reconstruction methods Franc¸ois Barbanc¸on,1 Steven N. Evans,2 Luay Nakhleh3 Don Ringe,4 , and Tandy Warnow,5,∗ 1 2

Source URL: tandy.cs.illinois.edu

• Phylogenetics
• Computational phylogenetics
• Maximum parsimony
• Models of DNA evolution
• Character evolution
• Edge
• Convergent evolution
• Quantitative comparative linguistics

Kevin J. Liu Homepage: http://www.cse.msu.edu/~kjl Email: Office: Department of Computer Science & Engineering

Source URL: www.cse.msu.edu

• Computational phylogenetics
• Bioinformatics
• Phylogenetics
• Guggenheim Fellows
• Genomics
• Tandy Warnow
• Comparative genomics
• Sequence alignment
• Multiple sequence alignment
• Phylogenetic comparative methods
• Phylogenetic tree
• Phylo

COMPARATIVE CULTURAL PHYLOGENETICS AND THE TRANSMISSION OF BELIEF IN AN ORAL SOCIETY Robert Aunger Department of Biological Anthropology,

Source URL: www.hygienecentral.org.uk

• Phylogenetics
• Maximum parsimony
• Phylogenetic tree
• Cladistics
• Evolution
• Systematics
• Cultural evolution
• Species
• Outline of evolution
• Phylogenetic comparative methods

Journal of Theoretical Biology–325 Contents lists available at ScienceDirect Journal of Theoretical Biology journal homepage: www.elsevier.com/locate/yjtbi

Source URL: www.michaelelliot.net

• Estimation theory
• Parametric statistics
• Regression analysis
• Phylogenetics
• Evolutionary biology
• Phylogenetic tree
• Linear regression
• Ancestral reconstruction
• Character evolution
• Maximum likelihood estimation
• Ordinary least squares
• Phylogenetic comparative methods