PyRy3D: a software tool for modeling of large macromolecular complexes ®All rights reserved STEP 13 CLUSTERING A SET OF MODELS The PyRy3D UCSF Chimera Extension lets the user automatically cluster PyRy3D models in order

Source URL: genesilico.pl

PyRy3D: a software tool for modeling of large macromolecular complexes ®All rights reserved STEP 12 RECORDING A MOVIE FROM SIMULATION The PyRy3D UCSF Chimera Extension allows to record a movie presenting structures gene

Source URL: genesilico.pl

Supporting Information Won et alpnasCHIMERA: Ste5**- Ste7N - alt MAPKK kinase domain Ste5WT Ste7

Source URL: limlab.ucsf.edu

• Chimera
• Signal transduction
• Protein kinases
• Mitogen-activated protein kinase

De novo protein structure determination from near-atomic-resolution cryo-EM maps

Source URL: www.bakerlab.org

• Bioinformatics
• Statistics
• Protein methods
• Homology modeling
• Root-mean-square deviation
• Beta sheet
• Cryo-electron microscopy
• UCSF Chimera
• STING
• Biology
• Protein structure
• Science

Microsoft Word - Viz-Antibody-AP-RCSB.docx

Source URL: education.rcsb.org

• Bioinformatics
• Biology
• Crystallography
• Protein Data Bank
• Antibody
• Chimera
• UCSF Chimera
• Science
• Biological databases
• Protein structure

Estimation of P- and E-Values for Profile-HMMs The three dimensional structures of proteins are usually associated with their properties and functions. Certain patterns in the DNA sequence of proteins are known to be clo

Source URL: www.marshallplan.at

• HMMER
• Hidden Markov model
• Pfam
• UCSF Chimera
• Protein family
• Bioinformatics
• Science
• Application software